logitT
This package is for version 3.10 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see logitT.
logit-t Package
Bioconductor version: 3.10
The logitT library implements the Logit-t algorithm introduced in --A high performance test of differential gene expression for oligonucleotide arrays-- by William J Lemon, Sandya Liyanarachchi and Ming You for use with Affymetrix data stored in an AffyBatch object in R.
Author: Tobias Guennel <tguennel at vcu.edu>
Maintainer: Tobias Guennel <tguennel at vcu.edu>
citation("logitT")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("logitT")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("logitT")| logitT primer | R Script | |
| Reference Manual |
Details
| biocViews | DifferentialExpression, Microarray, Software |
| Version | 1.44.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) (15.5 years) |
| License | GPL (>= 2) |
| Depends | affy |
| Imports | |
| System Requirements | |
| URL | http://www.bioconductor.org |
See More
| Suggests | SpikeInSubset |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | logitT_1.44.0.tar.gz |
| Windows Binary | logitT_1.44.0.zip |
| Mac OS X 10.11 (El Capitan) | logitT_1.44.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/logitT |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/logitT |
| Bioc Package Browser | https://code.bioconductor.org/browse/logitT/ |
| Package Short Url | https://bioconductor.org/packages/logitT/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.10 | Source Archive |