ecolitk
This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see ecolitk.
Meta-data and tools for E. coli
Bioconductor version: 3.10
Meta-data and tools to work with E. coli. The tools are mostly plotting functions to work with circular genomes. They can used with other genomes/plasmids.
Author: Laurent Gautier
Maintainer: Laurent Gautier <lgautier at gmail.com>
Citation (from within R, enter
citation("ecolitk")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ecolitk")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ecolitk")| ecolitk | R Script | |
| Reference Manual |
Details
| biocViews | Annotation, Software, Visualization |
| Version | 1.58.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 19 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.10) |
| Imports | Biobase, graphics, methods |
| System Requirements | |
| URL |
See More
| Suggests | ecoliLeucine, ecolicdf, graph, multtest, affy |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ecolitk_1.58.0.tar.gz |
| Windows Binary | ecolitk_1.58.0.zip |
| Mac OS X 10.11 (El Capitan) | ecolitk_1.58.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/ecolitk |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ecolitk |
| Bioc Package Browser | https://code.bioconductor.org/browse/ecolitk/ |
| Package Short Url | https://bioconductor.org/packages/ecolitk/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.10 | Source Archive |