TargetSearch

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see TargetSearch.

A package for the analysis of GC-MS metabolite profiling data


Bioconductor version: 3.10

This packages provides a targeted pre-processing method for GC-MS data.

Author: Alvaro Cuadros-Inostroza <acuadros+bioc at gmail.com>, Jan Lisec, Henning Redestig, Matt Hannah

Maintainer: Alvaro Cuadros-Inostroza <acuadros+bioc at gmail.com>

Citation (from within R, enter citation("TargetSearch")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TargetSearch")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TargetSearch")
RI correction extra PDF R Script
The TargetSearch Package PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews DecisionTree, ImmunoOncology, MassSpectrometry, Preprocessing, Software
Version 1.42.1
In Bioconductor since BioC 2.4 (R-2.9) (15 years)
License GPL (>= 2)
Depends ncdf4
Imports graphics, grDevices, methods, stats, utils, stringr, assertthat
System Requirements
URL https://github.com/acinostroza/TargetSearch
Bug Reports https://github.com/acinostroza/TargetSearch/issues
See More
Suggests TargetSearchData, BiocStyle, knitr
Linking To
Enhances
Depends On Me
Imports Me
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Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TargetSearch_1.42.1.tar.gz
Windows Binary TargetSearch_1.42.1.zip
Mac OS X 10.11 (El Capitan) TargetSearch_1.42.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/TargetSearch
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TargetSearch
Bioc Package Browser https://code.bioconductor.org/browse/TargetSearch/
Package Short Url https://bioconductor.org/packages/TargetSearch/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.10 Source Archive