GeneOverlap

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see GeneOverlap.

Test and visualize gene overlaps

Bioconductor version: 3.10

Test two sets of gene lists and visualize the results.

Author: Li Shen, Mount Sinai <shenli.sam at gmail.com>

Maintainer: Li Shen, Mount Sinai <shenli.sam at gmail.com>

Citation (from within R, enter citation("GeneOverlap")):

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GeneOverlap")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GeneOverlap")

Testing and visualizing gene overlaps with the "GeneOverlap" package	PDF	R Script
Reference Manual	PDF

biocViews	MultipleComparison, Software, Visualization
Version	1.22.0
In Bioconductor since	BioC 2.14 (R-3.1) (10 years)
License	GPL-3
Depends
Imports	stats, RColorBrewer, gplots, methods
System Requirements
URL	http://shenlab-sinai.github.io/shenlab-sinai/

Suggests	RUnit, BiocGenerics, BiocStyle
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Follow Installation instructions to use this package in your R session.

Source Package	GeneOverlap_1.22.0.tar.gz
Windows Binary	GeneOverlap_1.22.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	GeneOverlap_1.22.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/GeneOverlap
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/GeneOverlap
Bioc Package Browser	https://code.bioconductor.org/browse/GeneOverlap/
Package Short Url	https://bioconductor.org/packages/GeneOverlap/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.10	Source Archive