BiocCaseStudies
This package is for version 3.10 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see BiocCaseStudies.
BiocCaseStudies: Support for the Case Studies Monograph
Bioconductor version: 3.10
Software and data to support the case studies.
Author: R. Gentleman, W. Huber, F. Hahne, M. Morgan, S. Falcon
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R, enter
citation("BiocCaseStudies")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BiocCaseStudies")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | Infrastructure, Software |
| Version | 1.48.0 |
| In Bioconductor since | BioC 2.2 (R-2.7) (16 years) |
| License | Artistic-2.0 |
| Depends | tools, methods, utils, Biobase |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | affy(>= 1.17.3), affyPLM(>= 1.15.1), affyQCReport(>= 1.17.0), ALL(>= 1.4.3), annaffy(>= 1.11.1), annotate(>= 1.17.3), AnnotationDbi(>= 1.1.6), apComplex(>= 2.5.0), Biobase(>= 1.17.5), bioDist(>= 1.11.3), biocGraph(>= 1.1.1), biomaRt(>= 1.13.5), CCl4(>= 1.0.6), CLL(>= 1.2.4), Category(>= 2.5.0), class (>= 7.2-38), cluster (>= 1.11.9), convert(>= 1.15.0), gcrma(>= 2.11.1), genefilter(>= 1.17.6), geneplotter(>= 1.17.2), GO.db(>= 2.0.2), GOstats(>= 2.5.0), graph(>= 1.17.4), GSEABase(>= 1.1.13), hgu133a.db(>= 2.0.2), hgu95av2.db, hgu95av2cdf(>= 2.0.0), hgu95av2probe(>= 2.0.0), hopach(>= 1.13.0), KEGG.db(>= 2.0.2), kohonen (>= 2.0.2), lattice (>= 0.17.2), latticeExtra (>= 0.3-1), limma(>= 2.13.1), MASS (>= 7.2-38), MLInterfaces(>= 1.13.17), multtest(>= 1.19.0), org.Hs.eg.db(>= 2.0.2), ppiStats(>= 1.5.4), randomForest (>= 4.5-20), RBGL(>= 1.15.6), RColorBrewer (>= 1.0-2), Rgraphviz(>= 1.17.11), vsn(>= 3.4.0), weaver(>= 1.5.0), xtable (>= 1.5-2), yeastExpData(>= 0.9.11) |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BiocCaseStudies_1.48.0.tar.gz |
| Windows Binary | BiocCaseStudies_1.48.0.zip |
| Mac OS X 10.11 (El Capitan) | BiocCaseStudies_1.48.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BiocCaseStudies |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BiocCaseStudies |
| Bioc Package Browser | https://code.bioconductor.org/browse/BiocCaseStudies/ |
| Package Short Url | https://bioconductor.org/packages/BiocCaseStudies/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.10 | Source Archive |