To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Mmusculus.UCSC.mm10")

In most cases, you don't need to download the package archive at all.

BSgenome.Mmusculus.UCSC.mm10

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Mmusculus.UCSC.mm10.

Full genome sequences for Mus musculus (UCSC version mm10)

Bioconductor version: 3.1

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm10, Dec. 2011) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Mmusculus.UCSC.mm10")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Mmusculus.UCSC.mm10")


PDF		Reference Manual

biocViews	AnnotationData, BSgenome, Genetics, Mus_musculus
Version	1.4.0
License	Artistic-2.0
Depends	BSgenome(>= 1.33.5)
Imports	BSgenome
LinkingTo
Suggests	TxDb.Mmusculus.UCSC.mm10.knownGene
SystemRequirements
Enhances
URL
Depends On Me	BSgenome.Mmusculus.UCSC.mm10.masked
Imports Me	BSgenome.Mmusculus.UCSC.mm10.masked
Suggests Me	BSgenome, InPAS, MiRaGE, RnBeads, RnBeads.mm10

Follow Installation instructions to use this package in your R session.

Package Source	BSgenome.Mmusculus.UCSC.mm10_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Package Short Url	http://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm10/
Package Downloads Report	Download Stats

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