To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phastCons100way.UCSC.hg19")

In most cases, you don't need to download the package archive at all.

phastCons100way.UCSC.hg19

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see phastCons100way.UCSC.hg19.

UCSC phastCons conservation scores

Bioconductor version: 3.0

UCSC phastCons conservation scores from alignments of 100 vertebrate species

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("phastCons100way.UCSC.hg19")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phastCons100way.UCSC.hg19")


PDF		Reference Manual

biocViews	AnnotationData, ExperimentData, Genetics, Homo_sapiens, PhastConsDb
Version	1.1.0
License	Artistic-2.0
Depends	R (>= 3.0.0), VariantFiltering
Imports	utils, IRanges, GenomicRanges, BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	VariantFiltering
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	phastCons100way.UCSC.hg19_1.1.0.tar.gz
Windows Binary	phastCons100way.UCSC.hg19_1.1.0.zip
Mac OS X 10.6 (Snow Leopard)	phastCons100way.UCSC.hg19_1.1.0.tgz
Mac OS X 10.9 (Mavericks)	phastCons100way.UCSC.hg19_1.1.0.tgz
Subversion source	(username/password: readonly)
Package Short Url	http://bioconductor.org/packages/phastCons100way.UCSC.hg19/
Package Downloads Report	Download Stats

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