To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phenoDist")

In most cases, you don't need to download the package archive at all.

phenoDist

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see phenoDist.

Phenotypic distance measures

Bioconductor version: 3.0

PhenoDist is designed for measuring phenotypic distance in image-based high-throughput screening, in order to identify strong phenotypes and to group treatments into functional clusters.

Author: Xian Zhang, Gregoire Pau, Wolfgang Huber, Michael Boutros

Maintainer: Xian Zhang <xianzhang at gmail.com>

Citation (from within R, enter citation("phenoDist")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phenoDist")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("phenoDist")

PDF	R Script	Introduction to phenoDist
PDF		Reference Manual

Details

biocViews	CellBasedAssays, Software
Version	1.14.0
In Bioconductor since	BioC 2.8 (R-2.13) (5 years)
License	LGPL-2.1
Depends	R (>= 2.9.0), imageHTS, e1071
Imports
LinkingTo
Suggests	GOstats, MASS
SystemRequirements
Enhances
URL	http://www.dkfz.de/signaling http://www.embl.de/research/units/genome_biology/huber/
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	phenoDist_1.14.0.tar.gz
Windows Binary	phenoDist_1.14.0.zip
Mac OS X 10.6 (Snow Leopard)	phenoDist_1.14.0.tgz
Mac OS X 10.9 (Mavericks)	phenoDist_1.14.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/phenoDist/tree/release-3.0
Package Short Url	http://bioconductor.org/packages/phenoDist/
Package Downloads Report	Download Stats

Documentation »

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