To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("PICS")

In most cases, you don't need to download the package archive at all.

PICS

This package is for version 2.9 of Bioconductor; for the stable, up-to-date release version, see PICS.

Probabilistic inference of ChIP-seq

Bioconductor version: 2.9

Probabilistic inference of ChIP-Seq using an empirical Bayes mixture model approach.

Author: Xuekui Zhang <xzhang at stat.ubc.ca>, Raphael Gottardo <rgottard at fhcrc.org>

Maintainer: Arnaud Droit <arnaud.droit at crchuq.ulaval.ca>

Citation (from within R, enter citation("PICS")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("PICS")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PICS")

PDF		PICS.pdf
PDF		Reference Manual

biocViews	ChIPseq, Clustering, Sequencing, Software, Visualization
Version	1.8.0
In Bioconductor since	BioC 2.6 (R-2.11) (6 years)
License	Artistic-2.0
Depends	R (>= 2.11.0), IRanges, GenomicRanges, BSgenome
Imports	IRanges, GenomicRanges, BSgenome, methods, graphics, grDevices, stats
LinkingTo
Suggests	snowfall, ShortRead, rtracklayer
SystemRequirements
Enhances	multicore
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	PICS_1.8.0.tar.gz
Windows Binary	PICS_1.8.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/PICS/tree/release-2.9
Package Short Url	http://bioconductor.org/packages/PICS/
Package Downloads Report	Download Stats

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