\name{findSlices} \alias{findSlices} %- Also NEED an '\alias' for EACH other topic documented here. \title{calculates the coordinates of the subimages } \description{ internal function } \usage{ findSlices(imgFolder, pathToOutputFolder, numSlides) } %- maybe also 'usage' for other objects documented here. \arguments{ \item{imgFolder}{ folder to the subimages } \item{pathToOutputFolder}{ path to the output folder} \item{numSlides}{ number of sections in the image } } \details{ internal function } \value{ the sections for every image } \author{ Henrik Failmezger, failmezger@cip.ifi.lmu.de } \examples{ t = system.file("extdata", "trainingData.txt", package="CRImage") #read training data trainingData=read.table(t,header=TRUE) #create classifier classifier=createClassifier(trainingData,topo=FALSE)[[1]] #classify aperio f = system.file("extdata", package="CRImage") f=file.path(f,"8905") dir.create("AperiOutput") #takes long time! #processAperio(classifier=classifier,inputFolder=f,outputFolder="AperiOutput",identifier="Da",numSlides=2,cancerIdentifier="1",maxShape=800,minShape=40,failureRegion=2000) } % Add one or more standard keywords, see file 'KEYWORDS' in the % R documentation directory. \keyword{ misc }