To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mBPCR")

In most cases, you don't need to download the package archive at all.

mBPCR

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see mBPCR.

Bayesian Piecewise Constant Regression for DNA copy number estimation

Bioconductor version: 2.8

Estimates the DNA copy number profile using mBPCR to detect regions with copy number changes

Author: P.M.V. Rancoita <paola at idsia.ch>, with contributions from M. Hutter <marcus.hutter at anu.edu.au>

Maintainer: P.M.V. Rancoita <paola at idsia.ch>

Citation (from within R, enter citation("mBPCR")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mBPCR")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mBPCR")

PDF		mBPCR.pdf
PDF		Reference Manual

biocViews	Bioinformatics, CopyNumberVariants, Microarray, SNP, Software, aCGH
Version	1.6.0
In Bioconductor since	BioC 2.5 (R-2.10) (6.5 years)
License	GPL (>= 2)
Depends	oligoClasses, SNPchip
Imports	Biobase
LinkingTo
Suggests	xtable
SystemRequirements
Enhances
URL	http://www.idsia.ch/~paola/mBPCR
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	mBPCR_1.6.0.tar.gz
Windows Binary	mBPCR_1.6.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/mBPCR/tree/release-2.8
Package Short Url	http://bioconductor.org/packages/mBPCR/
Package Downloads Report	Download Stats

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