To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("NTW")
In most cases, you don't need to download the package archive at all.
NTW
|
This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see NTW.
Predict gene network using an Ordinary Differential Equation (ODE) based method
Bioconductor version: 2.8
This package predicts the gene-gene interaction network and identifies the direct transcriptional targets of the perturbation using an ODE (Ordinary Differential Equation) based method.
Author: Wei Xiao, Yin Jin, Darong Lai, Xinyi Yang, Yuanhua Liu, Christine Nardini
Maintainer: Yuanhua Liu <liuyuanhua at picb.ac.cn>
Citation (from within R,
enter citation("NTW")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("NTW")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("NTW")
| NTW.pdf | ||
| Reference Manual |
Details
| biocViews | Preprocessing, Software |
| Version | 1.2.0 |
| In Bioconductor since | BioC 2.7 (R-2.12) (5.5 years) |
| License | GPL-2 |
| Depends | R (>= 2.3.0) |
| Imports | mvtnorm, stats, utils |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | NTW_1.2.0.tar.gz |
| Windows Binary | NTW_1.2.0.zip |
| Mac OS X 10.6 (Snow Leopard) | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/NTW/tree/release-2.8 |
| Package Short Url | http://bioconductor.org/packages/NTW/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
