Bioconductor version: 2.7
Methods for segmenting, normalising and processing aCGH data; including plotting functions for visualising raw and segmented data for individual and multiple arrays.
Author: Mike L. Smith, John C. Marioni, Steven McKinney, Thomas Hardcastle, Natalie P. Thorne
Maintainer: John Marioni <marioni at uchicago.edu>
To install this package, start R and enter:
    source("http://bioconductor.org/biocLite.R")
    biocLite("snapCGH")
    To cite this package in a publication, start R and enter:
    citation("snapCGH")
    | R Script | Segmentation Overview | |
| Reference Manual | 
| biocViews | Microarray, CopyNumberVariants, TwoChannel, Preprocessing | 
| Depends | limma, DNAcopy, methods | 
| Imports | aCGH, cluster, DNAcopy, GLAD, graphics, grDevices, limma, methods, stats, tilingArray, utils | 
| Suggests | |
| System Requirements | |
| License | GPL | 
| URL | |
| Depends On Me | ADaCGH2 | 
| Imports Me | |
| Suggests Me | beadarraySNP | 
| Version | 1.20.0 | 
| Since | Bioconductor 1.8 (R-2.3) | 
| Package Source | snapCGH_1.20.0.tar.gz | 
| Windows Binary | snapCGH_1.20.0.zip (32- & 64-bit) | 
| MacOS 10.5 (Leopard) binary | snapCGH_1.20.0.tgz | 
| Package Downloads Report | Download Stats | 
 
  
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