RmiR
Package to work with miRNAs and miRNA targets with R
Bioconductor version: 2.7
Useful functions to merge microRNA and respective targets using differents databases
Author: Francesco Favero
Maintainer: Francesco Favero <favero.francesco at gmail.com>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("RmiR")
To cite this package in a publication, start R and enter:
citation("RmiR")
Documentation
| R Script | RmiR Vignette | |
| Reference Manual |
Details
| biocViews | Software, GeneExpression, Microarray, TimeCourse, Visualization |
| Depends | R (>= 2.7.0), RmiR.Hs.miRNA, RSVGTipsDevice |
| Imports | DBI, methods, stats |
| Suggests | hgug4112a.db, org.Hs.eg.db |
| System Requirements | |
| License | Artistic-2.0 |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | oneChannelGUI |
| Version | 1.6.0 |
| Since | Bioconductor 2.5 (R-2.10) |
Package Downloads
| Package Source | RmiR_1.6.0.tar.gz |
| Windows Binary | RmiR_1.6.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | RmiR_1.6.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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