Bioconductor version: 2.7
This package makes use of STAMP for comparing a set of motifs to a given database (e.g. JASPAR). It can also be used to visualize motifs, motif distributions, modules and filter motifs.
Author: Eloi Mercier, Raphael Gottardo
Maintainer: Eloi Mercier <eloi.mercier at ircm.qc.ca>, Raphael Gottardo <raphael.gottardo at ircm.qc.ca>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("MotIV")
To cite this package in a publication, start R and enter:
citation("MotIV")
R Script | The MotIV users guide | |
Reference Manual |
biocViews | Microarray, ChIPchip, ChIPSeq, GenomicSequence |
Depends | |
Imports | graphics, grid, IRanges, lattice, methods, rGADEM, stats, utils |
Suggests | rtracklayer |
System Requirements | |
License | GPL 2 |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Version | 1.4.0 |
Since | Bioconductor 2.6 (R-2.11) |
Package Source | MotIV_1.4.0.tar.gz |
Windows Binary | MotIV_1.4.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | MotIV_1.4.0.tgz |
Package Downloads Report | Download Stats |
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