| Package | Maintainer | Title |
|---|---|---|
| charm | Martin Aryee | Analysis of DNA methylation data from CHARM microarrays |
| HELP | Reid F. Thompson | Tools for HELP data analysis |
| les | Julian Gehring | Identifying Loci of Enhanced Significance in Tiling Microarray Data |
| lumi | Pan Du | BeadArray Specific Methods for Illumina Methylation and Expression Microarrays |
| MassArray | Reid F. Thompson | Analytical Tools for MassArray Data |
| methVisual | Arie Zackay | Methods for visualization and statistics on DNA methylation data |
| methylumi | Sean Davis | Handle Illumina methylation data |
| oligo | Benilton Carvalho | Preprocessing tools for oligonucleotide arrays. |