Bioconductor version: 2.6
cosmoGUI allows the user to interactively define constraint sets that can be used by the cosmo package to supervise the search for shared motifs in a set of DNA sequences. The constraints can be either adapted from a set of commonly used templates or defined from scratch.
Author: Fabian Gallusser, Oliver Bembom, and Sandrine Dudoit
Maintainer: Oliver Bembom <oliver.bembom at gmail.com>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("cosmoGUI")
To cite this package in a publication, start R and enter:
citation("cosmoGUI")
Reference Manual |
biocViews | SequenceMatching, GUI |
Depends | tkWidgets, cosmo |
Imports | |
Suggests | |
System Requirements | |
License | LGPL (>= 2) |
URL | http://cosmoweb.berkeley.edu/intro.html, http://www.bepress.com/ucbbiostat/paper209/ |
Depends On Me | |
Imports Me | |
Suggests Me | cosmo |
Version | 1.14.0 |
Since | Bioconductor 2.0 (R-2.5) |
Package Source | cosmoGUI_1.14.0.tar.gz |
Windows Binary | cosmoGUI_1.14.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | cosmoGUI_1.14.0.tgz |
Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!