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clusterStab
Compute cluster stability scores for microarray data
Bioconductor version: 2.6
This package can be used to estimate the number of clusters in a set of microarray data, as well as test the stability of these clusters.
Author: James W. MacDonald, Debashis Ghosh, Mark Smolkin
Maintainer: James W. MacDonald <jmacdon at med.umich.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("clusterStab")
To cite this package in a publication, start R and enter:
citation("clusterStab")
Documentation
| R Script | clusterStab Overview | |
| Reference Manual |
Details
| biocViews | Clustering |
| Depends | Biobase(>= 1.4.22), R (>= 1.9.0), methods |
| Imports | |
| Suggests | fibroEset, genefilter |
| System Requirements | |
| License | Artistic-2.0 |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.20.0 |
| Since | Bioconductor 1.7 (R-2.2) |
Package Downloads
| Package Source | clusterStab_1.20.0.tar.gz |
| Windows Binary | clusterStab_1.20.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | clusterStab_1.20.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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