\name{topDOLiteGenes} \alias{topDOLiteGenes} %- Also NEED an '\alias' for EACH other topic documented here. \title{ Present top DOLite enrichment test information with genes} \description{ Function to present top DOLite enichmentInfo of given GeneAnswers instance with genes. } \usage{ topDOLiteGenes(x, catTerm = TRUE, geneSymbol = TRUE, ...) } %- maybe also 'usage' for other objects documented here. \arguments{ \item{x}{ a given GeneAnswers instance with DOLite test } \item{catTerm}{ logic value to determine whether mapping DOLite IDs to DOLite terms } \item{geneSymbol}{ logic value to determine whether mapping gene Entrez IDs to gene symbols} \item{\dots}{ other parameters to transfer to topCategoryGenes } } \details{ See function topCategoryGenes help for details } \value{ print necessary information on the screen and save into a specified file if request. } \references{ ~put references to the literature/web site here ~ } \author{ Gang Feng, Pan Du and Simon Lin } \seealso{ ~~objects to See Also as \code{\link{help}}, ~~~ } \examples{ ##x is a GeneAnswers instance with DOLite test \dontrun{topDOLiteGenes(x, geneSymbol=TRUE, orderby='pvalue', top=10, topGenes='ALL', genesOrderBy='pValue', file=TRUE)} } % Add one or more standard keywords, see file 'KEYWORDS' in the % R documentation directory. \keyword{ IO }