VanillaICE

A Hidden Markov Model for high throughput genotyping arrays

Hidden Markov Models for characterizing chromosomal alterations in high throughput SNP arrays

Author	Robert Scharpf , Kevin Scharpf, and Ingo Ruczinski
Maintainer	Robert Scharpf

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("VanillaICE")

VanillaICE Vignette	PDF	R Script
Reference Manual

biocViews	Bioinformatics , DNACopyNumber , SNPsAndGeneticVariability , Visualization
Depends	R
Imports	SNPchip , stats
Suggests	genomewidesnp6Crlmm , hapmapsnp6 , RColorBrewer , genefilter , RSQLite , oligoClasses , Biobase , methods
System Requirements
License	LGPL-2
URL
Depends On Me
Imports Me
Suggests Me	SNPchip
Development History	Bioconductor Changelog