ArrayTools
geneChip Analysis Package
This package is designed to provide solutions for quality
assessment and to detect differentially expressed genes for the
Affymetrix GeneChips, including both 3' -arrays and gene 1.0-ST
arrays. The package generates comprehensive analysis reports in
HTML format. Hyperlinks on the report page will lead to a
series of QC plots, processed data, and differentially
expressed gene lists. Differentially expressed genes are
reported in tabular format with annotations hyperlinked to
online biological databases.
Author |
Xiwei Wu, Arthur Li |
Maintainer |
Arthur Li |
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("ArrayTools")
Documentation
Details
biocViews |
|
Depends |
R
,
affy
,
Biobase
,
graphics
,
grDevices
,
limma
,
methods
,
stats
,
utils
,
xtable
|
Imports |
|
Suggests |
|
System Requirements |
|
License |
LGPL(>= 2.0) |
URL |
|
Depends On Me |
|
Imports Me |
|
Suggests Me |
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Development History |
Bioconductor Changelog
|
Package Downloads