AffyExpress

Affymetrix Quality Assessment and Analysis Tool

The purpose of this package is to provide a comprehensive and easy-to-use tool for quality assessment and to identify differentially expressed genes in the Affymetrix gene expression data.

Author	Xiwei Wu , Xuejun Arthur Li
Maintainer	Xuejun Arthur Li

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("AffyExpress")

Documentation

1. Primer	PDF	R Script
Reference Manual

Details

biocViews	Microarray , OneChannel , QualityControl , Preprocessing , Bioinformatics , DifferentialExpression , Annotation , ReportWriting , Visualization
Depends	R , affy , limma
Imports
Suggests	simpleaffy , R2HTML , affyPLM , hgu95av2cdf , hgu95av2 , test3cdf , genefilter , estrogen , annaffy , gcrma
System Requirements
License	LGPL
URL
Depends On Me
Imports Me
Suggests Me
Development History	Bioconductor Changelog

Package Downloads

Package source	AffyExpress_1.10.0.tar.gz
Windows binary	AffyExpress_1.10.0.zip
MacOS X 10.4 (Tiger) binary	AffyExpress_1.10.0.tgz
MacOS X 10.5 (Leopard) binary	AffyExpress_1.10.0.tgz
Package Downloads Report	Downloads Stats