ABarray

Microarray QA and statistical data analysis for Applied Biosystems Genome Survey Micorarray (AB1700) gene expression data.

Automated pipline to perform gene expression analysis for Applied Biosystems Genome Survey Microarray (AB1700) data format. Functions include data preprocessing, filtering, control probe analysis, statistical analysis in one single function. A GUI interface is also provided. The raw data, processed data, graphics output and statistical results are organized into folders according to the analysis settings used.

Author Yongming Andrew Sun
Maintainer Yongming Andrew Sun

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("ABarray")

Documentation

ABarray gene expression PDF R Script
ABarray gene expression GUI interface PDF R Script
Reference Manual

Details

biocViews
Depends
Biobase , multtest , tcltk
Imports
Suggests
System Requirements
License GPL
URL
Depends On Me
Imports Me
Suggests Me
Development History Bioconductor Changelog

Package Downloads

Package source ABarray_1.12.0.tar.gz
Windows binary ABarray_1.12.0.zip
MacOS X 10.4 (Tiger) binary ABarray_1.12.0.tgz
MacOS X 10.5 (Leopard) binary ABarray_1.12.0.tgz
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