snpMatrix

The snp.matrix and X.snp.matrix classes

Implements classes and methods for large-scale SNP association studies

Author David Clayton and Hin-Tak Leung
Maintainer David Clayton

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("snpMatrix")

Documentation

Package Downloads
Imputation and meta-analysis
Principal components analysis
snpMatrix-paper-HumanHeridity2007.pdf
snpMatrix introduction
TDT tests
Reference Manual
Package source snpMatrix_1.6.1.tar.gz
Windows binary snpMatrix_1.6.1.zip
MacOS X 10.4 (Tiger) binary snpMatrix_1.6.1.tgz
MacOS X 10.5 (Leopard) binary snpMatrix_1.6.1.tgz
Package Downloads Report Downloads Stats

Details

biocViews
Microarray , SNPsAndGeneticVariability
Depends
R , survival , methods
Imports
Suggests
hexbin
System Requirements
License GNU General Public Licence (GPLv3)
URL http://www-gene.cimr.cam.ac.uk/clayton/software/
Depends On Me
GGBase , GGtools
Imports Me
Suggests Me
Development History Bioconductor Changelog