quantsmooth

Quantile smoothing and genomic visualization of array data

Implements quantile smoothing as introduced in: Quantile smoothing of array CGH data; Eilers PH, de Menezes RX; Bioinformatics. 2005 Apr 1;21(7):1146-53.

Author Jan Oosting, Paul Eilers, Renee Menezes
Maintainer Jan Oosting

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("quantsmooth")

Documentation

Package Downloads
quantsmooth
Reference Manual
Package source quantsmooth_1.8.0.tar.gz
Windows binary quantsmooth_1.8.0.zip
MacOS X 10.4 (Tiger) binary quantsmooth_1.8.0.tgz
MacOS X 10.5 (Leopard) binary quantsmooth_1.8.0.tgz
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Details

biocViews
Visualization , DNACopyNumber
Depends
quantreg , lodplot , grid
Imports
Suggests
System Requirements
License GPL V2
URL
Depends On Me
SIM , beadarraySNP
Imports Me
Suggests Me
Development History Bioconductor Changelog