IRanges

Low-level containers for storing sets of integer ranges

The IRanges class and its extensions are low-level containers for storing sets of integer ranges. A typical use of these containers in biology is for representing a set of chromosome regions. More specific extensions of the IRanges class will typically allow the storage of additional information attached to each chromosome region as well as a hierarchical relationship between these regions.

Author	H. Pages, P. Aboyoun and M. Lawrence
Maintainer	Biocore Team c/o BioC user list

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("IRanges")

Documentation

Package Downloads

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Reference Manual

Package source	IRanges_1.0.16.tar.gz
Windows binary	IRanges_1.0.16.zip
MacOS X 10.4 (Tiger) binary	IRanges_1.0.16.tgz
MacOS X 10.5 (Leopard) binary	IRanges_1.0.16.tgz
Package Downloads Report	Downloads Stats

Details

biocViews	Infrastructure , Genetics
Depends	R , methods , stats
Imports	methods , stats , Matrix
Suggests
System Requirements
License	Artistic-2.0
URL
Depends On Me	BSgenome , Biostrings , ShortRead
Imports Me	Biostrings , MEDME , ShortRead , rtracklayer
Suggests Me
Development History	Bioconductor Changelog