BSgenome

Infrastructure for Biostrings-based genome data packages

Infrastructure shared by all the Biostrings-based genome data packages

Author Herve Pages
Maintainer H. Pages

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("BSgenome")

Documentation

Package Downloads
How to forge a BSgenome data package
Efficient genome searching with Biostrings and the BSgenome data packages
Reference Manual
Package source BSgenome_1.10.5.tar.gz
Windows binary BSgenome_1.10.5.zip
MacOS X 10.4 (Tiger) binary BSgenome_1.10.5.tgz
MacOS X 10.5 (Leopard) binary BSgenome_1.10.5.tgz
Package Downloads Report Downloads Stats

Details

biocViews
Genetics , Infrastructure
Depends
R , methods , IRanges , Biostrings
Imports
Suggests
BSgenome.Celegans.UCSC.ce2 , BSgenome.Hsapiens.UCSC.hg18 , SNPlocs.Hsapiens.dbSNP.20071016 , hgu95av2probe , Biobase
System Requirements
License Artistic-2.0
URL
Depends On Me
Imports Me
MEDME
Suggests Me
Biostrings
Development History Bioconductor Changelog