mdqc

Mahalanobis Distance Quality Control for microarrays

MDQC is a multivariate quality assessment method for microarrays based on quality control (QC) reports. The Mahalanobis distance of an array's quality attributes is used to measure the similarity of the quality of that array against the quality of the other arrays. Then, arrays with unusually high distances can be flagged as potentially low-quality.

Author	Justin Harrington
Maintainer	Gabriela Cohen-Freue

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("mdqc")

Vignettes (Documentation)

Package Downloads

mdqcvignette.pdf

Source	mdqc_1.2.1.tar.gz
Windows binary	mdqc_1.2.1.zip
OS X binary	mdqc_1.2.1.tgz

Details

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Depends	R, cluster, MASS
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SystemRequirements
License	LGPL version 2 or newer
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