To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("HiTC")

In most cases, you don't need to download the package archive at all.

HiTC

This package is for version 2.13 of Bioconductor; for the stable, up-to-date release version, see HiTC.

High Throughput Chromosome Conformation Capture analysis

Bioconductor version: 2.13

The HiTC package was developed to explore high-throughput 'C' data such as 5C or Hi-C.

Author: Nicolas Servant

Maintainer: Nicolas Servant <nicolas.servant at curie.fr>

Citation (from within R, enter citation("HiTC")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("HiTC")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HiTC")

PDF	R Script	Hight-Throughput Chromosome Conformation Capture analysis
PDF		Reference Manual
Text		NEWS

biocViews	HighThroughputSequencing, Sequencing, Software
Version	1.6.0
In Bioconductor since	BioC 2.10 (R-2.15) (4 years)
License	Artistic-2.0
Depends	R (>= 2.15.0), methods, GenomicRanges, IRanges, Matrix, RColorBrewer
Imports	methods, Biobase, Biostrings, graphics, grDevices, rtracklayer
LinkingTo
Suggests	rtracklayer, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	HiTC_1.6.0.tar.gz
Windows Binary	HiTC_1.6.0.zip
Mac OS X 10.6 (Snow Leopard)	HiTC_1.6.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/HiTC/tree/release-2.13
Package Short Url	http://bioconductor.org/packages/HiTC/
Package Downloads Report	Download Stats

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