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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Athaliana.TAIR.TAIR9")
In most cases, you don't need to download the package archive at all.
BSgenome.Athaliana.TAIR.TAIR9
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This package is for version 2.12 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Athaliana.TAIR.TAIR9.
Arabidopsis thaliana full genome (TAIR9)
Bioconductor version: 2.12
Arabidopsis thaliana full genome as provided by TAIR (TAIR9 Genome Release) and stored in Biostrings objects. Note that TAIR10 is an "annotation release" based on the same genome assembly as TAIR9.
Author: H. Pages
Maintainer: Biocore Team c/o BioC user list <bioconductor at stat.math.ethz.ch>
Citation (from within R,
enter citation("BSgenome.Athaliana.TAIR.TAIR9")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Athaliana.TAIR.TAIR9")
Documentation
| Reference Manual |
Details
| biocViews | AnnotationData, Arabidopsis_thaliana, Genetics |
| Version | 1.3.18 |
| License | Artistic-2.0 |
| Depends | BSgenome(>= 1.19.2) |
| Imports | BSgenome |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | waveTiling |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | BSgenome.Athaliana.TAIR.TAIR9_1.3.18.tar.gz |
| Windows Binary | BSgenome.Athaliana.TAIR.TAIR9_1.3.18.zip |
| Mac OS X 10.6 (Snow Leopard) | BSgenome.Athaliana.TAIR.TAIR9_1.3.18.tgz |
| Package Short Url | http://bioconductor.org/packages/BSgenome.Athaliana.TAIR.TAIR9/ |
| Package Downloads Report | Download Stats |
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