To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("virtualArray")
In most cases, you don't need to download the package archive at all.
This package is for version 2.12 of Bioconductor; for the stable, up-to-date release version, see virtualArray.
Bioconductor version: 2.12
This package permits the user to combine raw data of different microarray platforms into one virtual array. It consists of several functions that act subsequently in a semi-automatic way. Doing as much of the data combination and letting the user concentrate on analysing the resulting virtual array.
Author: Andreas Heider
Maintainer: Andreas Heider <aheider at trm.uni-leipzig.de>
Citation (from within R,
enter citation("virtualArray")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("virtualArray")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("virtualArray")
R Script | virtualArray Vignette | |
virtualArray-016.pdf | ||
Reference Manual |
biocViews | Bioinformatics, DataImport, Microarray, MultipleComparisons, OneChannel, Preprocessing, Software |
Version | 1.4.1 |
In Bioconductor since | BioC 2.10 (R-2.15) (4 years) |
License | GPL-3 |
Depends | R (>= 2.15.0), BiocGenerics, methods, plyr, preprocessCore |
Imports | affy, affyPLM, AnnotationDbi, Biobase, gcrma, GEOquery, graphics, methods, reshape2, stats, utils, tseries, outliers |
LinkingTo | |
Suggests | affydata, plier, limma, lumi, org.Hs.eg.db |
SystemRequirements | |
Enhances | multicore, BiocParallel |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | virtualArray_1.4.1.tar.gz |
Windows Binary | virtualArray_1.4.1.zip |
Mac OS X 10.6 (Snow Leopard) | virtualArray_1.4.1.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/virtualArray/tree/release-2.12 |
Package Short Url | http://bioconductor.org/packages/virtualArray/ |
Package Downloads Report | Download Stats |
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