To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("plgem")
In most cases, you don't need to download the package archive at all.
This package is for version 2.12 of Bioconductor; for the stable, up-to-date release version, see plgem.
Bioconductor version: 2.12
The Power Law Global Error Model (PLGEM) has been shown to faithfully model the variance-versus-mean dependence that exists in a variety of genome-wide datasets, including microarray and proteomics data. The use of PLGEM has been shown to improve the detection of differentially expressed genes or proteins in these datasets.
Author: Mattia Pelizzola <mattia.pelizzola at gmail.com> and Norman Pavelka <normanpavelka at gmail.com>
Maintainer: Norman Pavelka <normanpavelka at gmail.com>
Citation (from within R,
enter citation("plgem")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("plgem")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("plgem")
R Script | An introduction to PLGEM | |
Reference Manual | ||
Text | NEWS |
biocViews | DifferentialExpression, Microarray, Proteomics, Software |
Version | 1.32.0 |
In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 11 years) |
License | GPL-2 |
Depends | R (>= 2.10), Biobase(>= 2.5.5), MASS |
Imports | utils |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | http://www.genopolis.it |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | plgem_1.32.0.tar.gz |
Windows Binary | plgem_1.32.0.zip |
Mac OS X 10.6 (Snow Leopard) | plgem_1.32.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/plgem/tree/release-2.12 |
Package Short Url | http://bioconductor.org/packages/plgem/ |
Package Downloads Report | Download Stats |
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