To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("nucleR")

In most cases, you don't need to download the package archive at all.

nucleR

This package is for version 2.12 of Bioconductor; for the stable, up-to-date release version, see nucleR.

Nucleosome positioning package for R

Bioconductor version: 2.12

Nucleosome positioning for Tiling Arrays and Next Generation Sequencing Experiments

Author: Oscar Flores, David Rossell

Maintainer: Oscar Flores <oflores at mmb.pcb.ub.es>

Citation (from within R, enter citation("nucleR")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("nucleR")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("nucleR")

PDF	R Script	Quick analysis of nucleosome positioning experiments
PDF		Reference Manual
Text		NEWS

biocViews	ChIPseq, Genetics, HighThroughputSequencing, Microarray, Sequencing, Software
Version	1.8.0
In Bioconductor since	BioC 2.9 (R-2.14) (4.5 years)
License	LGPL (>= 3)
Depends	methods, BiocGenerics(>= 0.1.0), IRanges(>= 1.13.5), Biobase(>= 2.15.1), ShortRead, parallel
Imports	methods, BiocGenerics, IRanges, Biobase, ShortRead, GenomicRanges, stats
LinkingTo
Suggests
SystemRequirements
Enhances	htSeqTools
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	nucleR_1.8.0.tar.gz
Windows Binary	nucleR_1.8.0.zip
Mac OS X 10.6 (Snow Leopard)	nucleR_1.8.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/nucleR/tree/release-2.12
Package Short Url	http://bioconductor.org/packages/nucleR/
Package Downloads Report	Download Stats

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