To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("bsseq")

In most cases, you don't need to download the package archive at all.

bsseq

This package is for version 2.12 of Bioconductor; for the stable, up-to-date release version, see bsseq.

Analyze, manage and store bisulfite sequencing data

Bioconductor version: 2.12

Tools for analyzing and visualizing bisulfite sequencing data

Author: Kasper Daniel Hansen

Maintainer: Kasper Daniel Hansen <khansen at jhsph.edu>

Citation (from within R, enter citation("bsseq")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("bsseq")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("bsseq")

biocViews	DNAMethylation, Software
Version	0.8.0
In Bioconductor since	BioC 2.11 (R-2.15) (3.5 years)
License	Artistic-2.0
Depends	R (>= 2.15), methods, BiocGenerics, IRanges, GenomicRanges, parallel, matrixStats
Imports	scales, stats, graphics, Biobase, locfit
LinkingTo
Suggests	RUnit, bsseqData
SystemRequirements
Enhances
URL
Depends On Me	bsseqData
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	bsseq_0.8.0.tar.gz
Windows Binary	bsseq_0.8.0.zip
Mac OS X 10.6 (Snow Leopard)	bsseq_0.8.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/bsseq/tree/release-2.12
Package Short Url	http://bioconductor.org/packages/bsseq/
Package Downloads Report	Download Stats

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