To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RCytoscape")

In most cases, you don't need to download the package archive at all.

RCytoscape

This package is for version 2.12 of Bioconductor; for the stable, up-to-date release version, see RCytoscape.

Display and manipulate graphs in Cytoscape

Bioconductor version: 2.12

Interactvive viewing and exploration of graphs, connecting R to Cytoscape.

Author: Paul Shannon

Maintainer: Paul Shannon <pshannon at systemsbiology.org>

Citation (from within R, enter citation("RCytoscape")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RCytoscape")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RCytoscape")

biocViews	ConnectTools, GraphsAndNetworks, NetworkVisualization, Software
Version	1.10.0
In Bioconductor since	BioC 2.7 (R-2.12) (5.5 years)
License	GPL-2
Depends	R (>= 2.14.0), graph(>= 1.31.0), XMLRPC (>= 0.2.4)
Imports	methods, XMLRPC, BiocGenerics
LinkingTo
Suggests	RUnit
SystemRequirements
Enhances
URL	http://rcytoscape.systemsbiology.net
Depends On Me
Imports Me	categoryCompare, NCIgraph, RamiGO
Suggests Me	clipper, GeneNetworkBuilder, graphite
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	RCytoscape_1.10.0.tar.gz
Windows Binary	RCytoscape_1.10.0.zip
Mac OS X 10.6 (Snow Leopard)	RCytoscape_1.10.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/RCytoscape/tree/release-2.12
Package Short Url	http://bioconductor.org/packages/RCytoscape/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: