To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("DECIPHER")

In most cases, you don't need to download the package archive at all.

DECIPHER

This package is for version 2.12 of Bioconductor; for the stable, up-to-date release version, see DECIPHER.

Database Enabled Code for Ideal Probe Hybridization Employing R

Bioconductor version: 2.12

A toolset that assist in the design of hybridization probes.

Author: Erik Wright

Maintainer: Erik Wright <DECIPHER at cae.wisc.edu>

Citation (from within R, enter citation("DECIPHER")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("DECIPHER")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DECIPHER")

PDF	R Script	Design Group-Specific Primers
PDF	R Script	Finding Chimeric Sequences
PDF	R Script	Getting Started DECIPHERing
PDF		Reference Manual

biocViews	Clustering, DataImport, Genetics, Infrastructure, Microarray, QualityControl, Sequencing, Software, Visualization
Version	1.6.0
In Bioconductor since	BioC 2.9 (R-2.14) (4.5 years)
License	GPL-3
Depends	R (>= 2.13.0), Biostrings(>= 2.16), RSQLite (>= 0.9), IRanges, stats
Imports	Biostrings, RSQLite, IRanges, stats
LinkingTo	Biostrings, RSQLite, IRanges, stats
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	DECIPHER_1.6.0.tar.gz
Windows Binary	DECIPHER_1.6.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	DECIPHER_1.6.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/DECIPHER/tree/release-2.12
Package Short Url	http://bioconductor.org/packages/DECIPHER/
Package Downloads Report	Download Stats

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