To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("BiocCaseStudies")
In most cases, you don't need to download the package archive at all.
This package is for version 2.12 of Bioconductor; for the stable, up-to-date release version, see BiocCaseStudies.
Bioconductor version: 2.12
Software and data to support the case studies.
Author: R. Gentleman, W. Huber, F. Hahne, M. Morgan, S. Falcon
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R,
enter citation("BiocCaseStudies")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("BiocCaseStudies")
Reference Manual |
biocViews | Bioinformatics, Infrastructure, Software |
Version | 1.22.0 |
In Bioconductor since | BioC 2.2 (R-2.7) (8 years) |
License | Artistic-2.0 |
Depends | tools, methods, utils, Biobase |
Imports | |
LinkingTo | |
Suggests | affy(>= 1.17.3), affyPLM(>= 1.15.1), affyQCReport(>= 1.17.0), ALL(>= 1.4.3), annaffy(>= 1.11.1), annotate(>= 1.17.3), AnnotationDbi(>= 1.1.6), apComplex(>= 2.5.0), Biobase(>= 1.17.5), bioDist(>= 1.11.3), biocGraph(>= 1.1.1), biomaRt(>= 1.13.5), CCl4(>= 1.0.6), CLL(>= 1.2.4), Category(>= 2.5.0), class (>= 7.2-38), cluster (>= 1.11.9), convert(>= 1.15.0), gcrma(>= 2.11.1), genefilter(>= 1.17.6), geneplotter(>= 1.17.2), GO.db(>= 2.0.2), GOstats(>= 2.5.0), graph(>= 1.17.4), GSEABase(>= 1.1.13), hgu133a.db(>= 2.0.2), hgu95av2.db, hgu95av2cdf(>= 2.0.0), hgu95av2probe(>= 2.0.0), hopach(>= 1.13.0), KEGG.db(>= 2.0.2), kohonen (>= 2.0.2), lattice (>= 0.17.2), latticeExtra (>= 0.3-1), limma(>= 2.13.1), MASS (>= 7.2-38), MLInterfaces(>= 1.13.17), multtest(>= 1.19.0), org.Hs.eg.db(>= 2.0.2), ppiStats(>= 1.5.4), randomForest (>= 4.5-20), RBGL(>= 1.15.6), RColorBrewer (>= 1.0-2), Rgraphviz(>= 1.17.11), vsn(>= 3.4.0), weaver(>= 1.5.0), xtable (>= 1.5-2), yeastExpData(>= 0.9.11) |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | BiocCaseStudies_1.22.0.tar.gz |
Windows Binary | BiocCaseStudies_1.22.0.zip |
Mac OS X 10.6 (Snow Leopard) | BiocCaseStudies_1.22.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/BiocCaseStudies/tree/release-2.12 |
Package Short Url | http://bioconductor.org/packages/BiocCaseStudies/ |
Package Downloads Report | Download Stats |
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