\name{snpgr17} \alias{snpgr17} \docType{data} \title{ SNP locations for chr 17 } \description{ SNP locations for chr 17 } \usage{data(snpgr17)} \format{ The format is: \cr Formal class 'GRanges' [package "GenomicRanges"] with 6 slots \cr ..@ seqnames :Formal class 'Rle' [package "IRanges"] with 4 slots \cr .. .. ..@ values : Factor w/ 1 level "chr17": 1 \cr .. .. ..@ lengths : int 316396 \cr .. .. ..@ elementMetadata: NULL \cr .. .. ..@ metadata : list() \cr ..@ ranges :Formal class 'IRanges' [package "IRanges"] with 6 slots \cr .. .. ..@ start : int [1:316396] 6934 7214 7242 8611 11743 11830 13546 13905 14122 14300 ... \cr .. .. ..@ width : int [1:316396] 1 1 1 1 1 1 1 1 1 1 ... \cr .. .. ..@ NAMES : chr [1:316396] "rs1106176" "rs6420494" "rs6420495" "rs62054996" ... \cr .. .. ..@ elementType : chr "integer" \cr .. .. ..@ elementMetadata: NULL \cr .. .. ..@ metadata : list() \cr ..@ strand :Formal class 'Rle' [package "IRanges"] with 4 slots \cr .. .. ..@ values : Factor w/ 3 levels "+","-","*": 3 \cr .. .. ..@ lengths : int 316396 \cr .. .. ..@ elementMetadata: NULL \cr .. .. ..@ metadata : list() \cr ..@ elementMetadata:Formal class 'DataFrame' [package "IRanges"] with 6 slots \cr .. .. ..@ rownames : NULL \cr .. .. ..@ nrows : int 316396 \cr .. .. ..@ listData : Named list() \cr .. .. ..@ elementType : chr "ANY" \cr .. .. ..@ elementMetadata: NULL \cr .. .. ..@ metadata : list() \cr ..@ seqinfo :Formal class 'Seqinfo' [package "GenomicRanges"] with 3 slots \cr .. .. ..@ seqnames : chr "chr17" \cr .. .. ..@ seqlengths : int NA \cr .. .. ..@ is_circular: logi NA \cr ..@ metadata : list() \cr } %\details{ %%% ~~ If necessary, more details than the __description__ above ~~ %} %\source{ %%% ~~ reference to a publication or URL from which the data were obtained ~~ %} %\references{ %%% ~~ possibly secondary sources and usages ~~ %} \examples{ data(snpgr17) snpgr17 ## maybe str(snpgr17) ; plot(snpgr17) ... } \keyword{datasets}