\name{PFAMPDB2AC} \alias{PFAMPDB2AC} \title{Mappings from a PDB ID to a PFAM Accession number} \description{ This is an R object that always contains mappings from a PDB ID to a PFAM accession (AC) } \details{ The PFAM accession number has been attached to the PDB IDs in this object. More Details: PDB (\url{http://www.rcsb.org/pdb/index.html}), the single worldwide repository for the processing and distribution of 3-D biological macromolecular structure data. Reference: H.M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T.N. Bhat, H. Weissig, I.N. Shindyalov, P.E. Bourne: The Protein Data Bank. Nucleic Acids Research , 28 pp. 235-242 (2000) } \references{\url{http://www.sanger.ac.uk/Software/Pfam/} and \url{ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt}} \examples{ #To map from PDB to PFAM IDs: x <- PFAMPDB2AC # Get the PDB identifiers that are mapped to a PFAM ID mapped_keys <- mappedkeys(x) # Convert to a list xx <- as.list(x[mapped_keys]) if(length(xx) > 0) { # Get the PDB ID for the first five CAZYs xx[1:5] # Get the first one xx[[1]] } } \keyword{datasets}