\name{LAPOINTEGO2PROBE} \alias{LAPOINTEGO2PROBE} \title{Map between Gene Ontology (GO) and Manufacturer Identifiers} \description{ LAPOINTEGO2PROBE is an R object that provides mappings between GO identifiers and manufacturer identifiers. } \details{ Each GO term maps to a named vector of manufacturer identifiers. The name associated with each manufacturer identifier corresponds to the evidence code for that GO identifier. The evidence code indicates what kind of evidence supports the association between the GO and Entrez Gene identifiers. Evidence codes currently in use include: IMP - inferred from mutant phenotype IGI - inferred from genetic interaction IPI - inferred from physical interaction ISS - inferred from sequence similarity IDA - inferred from direct assay IEP - inferred from expression pattern IEA - inferred from electronic annotation TAS - traceable author statement NAS - non-traceable author statement ND - no biological data available IC - inferred by curator A GO identifier may be mapped to the same probe identifier more than once but the evidence code can be different. Mappings between Gene Ontology identifiers an Gene Ontology terms and other information are available in a separate data package named GO. Mappings were based on data provided by: Entrez Gene ftp://ftp.ncbi.nlm.nih.gov/gene/DATA With a date stamp from the source of: 2012-Mar7 } \references{ \url{ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/} } \examples{ # Convert to a list xx <- as.list(LAPOINTEGO2PROBE) if(length(xx) > 0){ # Get the probe identifiers for the top 2nd and 3nd GO identifiers goids <- xx[2:3] # Get the probe identifiers for the first element of goids goids[[1]] # Evidence code for the mappings names(goids[[1]]) } } \keyword{datasets}