\name{nr} \alias{nr} \title{Print out all the normalization ratios for each subset in a specified taxinomic rank of a manta object} \description{ . } \usage{ nr(obj, meta.lev, pair) } \arguments{ \item{obj}{A manta object.} \item{meta.lev}{which taxinomic rank to use for subset normalization estimation.} \item{pair}{A named vector of conditions factors} } \value{ table of normalization ratios } \seealso{ manta, meta2manta } \examples{ manta.path <- system.file("extdata","PapaGO-BLAST.results-diatoms.Rdata", package="manta") load(manta.path) x <- calcNormFactors(x) conditions <- factor(x=1:2, labels=c('ambient','plusFe')); names(conditions) <- c('ref','obs') nr(x, meta.lev='genus_sp', pair=conditions) }