quantsmooth

Quantile smoothing and genomic visualization of array data

Implements quantile smoothing as introduced in: Quantile smoothing of array CGH data; Eilers PH, de Menezes RX; Bioinformatics. 2005 Apr 1;21(7):1146-53.

Author Jan Oosting, Paul Eilers, Renee Menezes
Maintainer Jan Oosting

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("quantsmooth")

Vignettes (Documentation)

Package Downloads
quantsmooth.pdf
Source quantsmooth_1.4.0.tar.gz
Windows binary quantsmooth_1.4.0.zip
OS X binary quantsmooth_1.4.0.tgz

Details

biocViews
Visualization , DNACopyNumber
Depends quantreg, lodplot
Suggests
Imports
SystemRequirements
License GPL V2
URL
dependsOnMe beadarraySNP
suggestsMe