prada

Data analysis for cell-based functional assays

Tools for analysing and navigating data from high-throughput phenotyping experiments based on cellular assays and fluorescent detection (flow cytometry (FACS), high-content screening microscopy).

Author	Florian Hahne , Wolfgang Huber , Markus Ruschhaupt , Joern Toedling
Maintainer	Florian Hahne

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("prada")

Vignettes (Documentation)

Package Downloads

norm2.pdf

prada2cellHTS.pdf

Source	prada_1.14.0.tar.gz
Windows binary	prada_1.14.0.zip
OS X binary	prada_1.14.0.tgz

Details

biocViews	CellBasedAssays , Visualization
Depends	R, Biobase, RColorBrewer, grid, methods, rrcov
Suggests	cellHTS, rflowcyt, tcltk
Imports	MASS, KernSmooth, RColorBrewer, geneplotter
SystemRequirements
License	LPGL
URL	http://www.dkfz.de/mga/whuber, http://www.dkfz.de/LIFEdb
dependsOnMe	cellHTS2, cellHTS, rflowcyt
suggestsMe