PCOT2 is a permutation-based method for investigating changes in the activity of multi-gene networks. It utilizes inter-gene correlation information to detect significant alterations in gene network activities. Currently it can be applied to two-sample comparisons.
| Author | Sarah Song, Mik Black |
| Maintainer | Sarah Song |
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("pcot2")
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| Depends | R, grDevices, Biobase, amap |
| Suggests | multtest, hu6800, KEGG, mvtnorm |
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| License | GPL version 2 or newer |
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