This package was developed to simplify the use of Bioconductor tools for beginners having limited or no experience in writing R code. This library provides a graphical interface allowing QC, filtering, statistical validation, and alternative splicing analysis. Affymetrix 3' IVT, Human Gene 1.0 ST and exon arrays are actually implemented.
| Author | Raffale A Calogero, Bioinformatics and Genomics Unit, Dept. of Clinical and Biological Sciences Torino (Italy) |
| Maintainer | Raffaele A Calogero |
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("oneChannelGUI")
Vignettes (Documentation) |
Package Downloads |
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| biocViews | |
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| Depends | Biobase, affylmGUI, tkWidgets |
| Suggests | annotate, GOstats, genefilter, maSigPro, pamr, pdmclass, Rgraphviz, affy, annaffy, affyPLM, multtest, ssize, sizepower, siggenes, RankProd, humanLLMappings, mouseLLMappings, ratLLMappings, metaArray |
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| SystemRequirements | |
| License | The Artistic License, Version 2.0 |
| URL | http://www.bioinformatica.unito.it/oneChannelGUI/ |
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| suggestsMe |