SAGx

Statistical Analysis of the GeneChip

A package for retrieval, preparation and analysis of data from the Affymetrix GeneChip. In particular the issue of identifying differentially expressed genes is addressed.

Author	Per Broberg
Maintainer	Per Broberg

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("SAGx")

Vignettes (Documentation)

Package Downloads

samroc-ex.pdf

Source	SAGx_1.12.0.tar.gz
Windows binary	SAGx_1.12.0.zip
OS X binary	SAGx_1.12.0.tgz

Details

biocViews	Microarray , OneChannel , Preprocessing , DataImport , Statistics , DifferentialExpression , Clustering , MultipleComparisons
Depends	R, stats, multtest, methods
Suggests	KEGG, hu6800
Imports	Biobase
SystemRequirements
License	GNU GPL.
URL	http://home.swipnet.se/pibroberg/expression_hemsida1.html
dependsOnMe
suggestsMe