GOstats

Tools for manipulating GO and microarrays.

A set of tools for interacting with GO and microarray data. A variety of basic manipulation tools for graphs, hypothesis testing and other simple calculations.

Author	R. Gentleman and S. Falcon
Maintainer	Robert Gentleman

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("GOstats")

Vignettes (Documentation)

Package Downloads

GOstatsHyperG.pdf

GOvis.pdf

Source	GOstats_2.4.0.tar.gz
Windows binary	GOstats_2.4.0.zip
OS X binary	GOstats_2.4.0.tgz

Details

biocViews	Statistics , Annotation , GO , MultipleComparisons
Depends	graph, GO.db, annotate, RBGL, Biobase, Category, methods
Suggests	hgu95av2.db, ALL, multtest, genefilter, RColorBrewer, Rgraphviz, xtable, SparseM, GO
Imports	Biobase, Category, methods, AnnotationDbi
SystemRequirements
License	The Artistic License, Version 2.0
URL
dependsOnMe	ScISI, affycoretools, ppiStats
suggestsMe	globaltest, iSNetwork, oneChannelGUI