annotate

Annotation for microarrays

Using R enviroments for annotation.

Author R. Gentleman
Maintainer Biocore Team

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("annotate")

Vignettes (Documentation)

Package Downloads
GOusage.pdf
annotate.pdf
chromLoc.pdf
prettyOutput.pdf
query.pdf
useDataPkgs.pdf
useHomology.pdf
useProbeInfo.pdf
Source annotate_1.14.1.tar.gz
Windows binary annotate_1.14.1.zip
OS X binary annotate_1.14.1.tgz

Details

biocViews
Annotation , Pathways , GO , Affymetrix
Depends R, methods, Biobase
Suggests hgu95av2, genefilter, Biostrings, rae230a, rae230aprobe, tkWidgets, XML, hsahomology, xlahomology, GO
Imports
SystemRequirements
License The Artistic License, Version 2.0
URL
dependsOnMe AnnBuilder, Category, GOstats, SAGElyzer, SemSim, affycoretools, codelink, geneplotter, goTools, iSNetwork, idiogram, lumi, macat, ontoTools, puma, splicegear, topGO
suggestsMe biomaRt, oneChannelGUI, siggenes