pcot2

Principle Coordinates and Hotelling's T-Square method

PCOT2 is a permutation-based method for investigating changes in the activity of multi-gene networks. It utilizes inter-gene correlation information to detect significant alterations in gene network activities. Currently it can be applied to two-sample comparisons.

Author Sarah Song, Mik Black
Maintainer Sarah Song

Vignettes (Documentation)

Package Downloads

HowToUseGeneLocator.pdf
pcot2.pdf
Source pcot2_1.2.0.tar.gz
Windows binary pcot2_1.2.0.zip
OS X binary pcot2_1.2.0.tgz

Details

biocViews
Depends R, grDevices, Biobase, amap
Suggests multtest, hu6800, KEGG, mvtnorm
Imports
SystemRequirements
License GPL version 2 or newer
URL
dependsOnMe
suggestsMe