| Package | Maintainer | Title |
|---|---|---|
| aCGH | Jane Fridlyand | Classes and functions for Array Comparative Genomic Hybridization data. |
| beadarraySNP | Jan Oosting | Normalization and reporting of Illumina SNP bead arrays |
| DNAcopy | E. S. Venkatraman | DNA copy number data analysis |
| GLAD | Philippe Hupé | Gain and Loss Analysis of DNA |
| MANOR | Pierre Neuvial | CGH Micro-Array NORmalization |
| quantsmooth | Jan Oosting | Quantile smoothing and genomic visualization of array data |
| reb | Karl J. Dykema | Regional Expression Biases |
| snapCGH | Mike Smith | Segmentation, normalisation and processing of aCGH data. |